Visualize cell genealogy — augment_genealogy • tumopp

Visualize cell genealogy

Usage

augment_genealogy(graph, lengths = numeric(0))

gggenealogy(data, mapping = ggplot2::aes(), ...)

Arguments

graph: igraph
lengths: lengths of edges. edge_lengths() is useful for this. The edge attribute "weight" is used if TRUE.
data: tbl from augment_genealogy()
mapping: ggplot2::aes()
...: passed to ggplot2::geom_segment()

Details

augment_genealogy calculates coordinates of nodes and edges for plotting.

gggenealogy() creates a basic ggplot object.