tek::DNA< N > Class Template Reference

DNA class. More...

#include <dna.hpp>

Public Member Functions
	DNA () noexcept=default
	default constructor
	DNA (const DNA &)=default
	default copy constructor
	DNA (DNA &&) noexcept=default
	default move constructor
	DNA (std::valarray< uint_fast8_t > &&s) noexcept
	construct from sequence
uint_fast32_t	count () const noexcept
	deviation from the original
template<class URBG>
void	flip (uint_fast32_t i, URBG &engine) noexcept
	mutate i-th site
const char &	operator[] (uint_fast32_t i) const noexcept
	get i-th nucleotide
uint_fast8_t	get (uint_fast32_t i) const noexcept
	get i-th nucleotide as integer
std::ostream &	write (std::ostream &ost) const
	translate integer to nucleotide character and print
uint_fast32_t	operator- (const DNA &other) const noexcept
	Hamming distance.

Static Private Member Functions
static const char &	translate (uint_fast8_t x) noexcept
	translate integer to character

Private Attributes
std::bitset< N >	has_3bonds_
	{0: AT, 1: GC}
std::bitset< N >	is_pyrimidine_
	{0: AG, 1: TC}

Friends
std::ostream &	operator<< (std::ostream &ost, const DNA &x)
	shortcut of write()

Detailed Description

template<size_t N>
class tek::DNA< N >

DNA class.

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The documentation for this class was generated from the following file:

• src/dna.hpp