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read_confs reads config files.

Usage

read_confs(indirs = getwd(), mc.cores = getOption("mc.cores", 1L))

read_results(
  indirs = getwd(),
  mc.cores = getOption("mc.cores", 1L),
  graph = TRUE
)

read_populations(indirs = getwd(), mc.cores = getOption("mc.cores", 1L))

read_snapshots(indirs = getwd(), mc.cores = getOption("mc.cores", 1L))

read_tumopp(file)

Arguments

indirs

a string vector

mc.cores

The number of cores to use for concurrent execution.

graph

add graph column if TRUE

file

passed as the first argument of readr::read_tsv()

Details

read_results reads configs and populations as a nested tibble.

read_populations reads populations.

read_snapshots calls read_results() and reads snapshots.

read_tumopp is an alias of readr::read_tsv() with some options to read result files: population.tsv.gz and snapshots.tsv.gz.