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tumopp: Tumor growth simulator in C++
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This is the complete list of members for tumopp::Tissue, including all inherited members.
| benchmark_ | tumopp::Tissue | private |
| cemetery_ | tumopp::Tissue | private |
| coord_func_ | tumopp::Tissue | private |
| drivers_ | tumopp::Tissue | private |
| engine_ | tumopp::Tissue | private |
| entomb(const std::shared_ptr< Cell > &) | tumopp::Tissue | private |
| extant_cells_ | tumopp::Tissue | private |
| grow(size_t max_size, double max_time=100.0, double snapshot_interval=0.0, size_t recording_early_growth=0u, size_t mutation_timing=0u) | tumopp::Tissue | |
| id_tail_ | tumopp::Tissue | private |
| init_coord(unsigned dimensions, const std::string &coordinate) | tumopp::Tissue | private |
| init_insert_function(const std::string &local_density_effect, const std::string &displacement_path) | tumopp::Tissue | private |
| insert | tumopp::Tissue | private |
| insert_adjacent(const std::shared_ptr< Cell > &x) | tumopp::Tissue | private |
| migrate(const std::shared_ptr< Cell > &) | tumopp::Tissue | private |
| num_empty_neighbors(const coord_t &) const | tumopp::Tissue | private |
| operator<<(std::ostream &ost, const Tissue &tissue) | tumopp::Tissue | friend |
| plateau(double time) | tumopp::Tissue | |
| positional_value(const coord_t &) const | tumopp::Tissue | inlineprivate |
| push(std::shared_ptr< Cell > moving, const coord_t &direction) | tumopp::Tissue | private |
| push_minimum_drag(std::shared_ptr< Cell > moving) | tumopp::Tissue | private |
| queue_ | tumopp::Tissue | private |
| queue_push(const std::shared_ptr< Cell > &, bool surrounded=false) | tumopp::Tissue | private |
| recorded_ | tumopp::Tissue | mutableprivate |
| roulette_direction(const coord_t ¤t) const | tumopp::Tissue | private |
| size() const noexcept | tumopp::Tissue | inline |
| snapshots_ | tumopp::Tissue | private |
| snapshots_append() | tumopp::Tissue | private |
| steps_to_empty(const coord_t ¤t, const coord_t &direction) const | tumopp::Tissue | private |
| stroll(std::shared_ptr< Cell > moving, const coord_t &direction) | tumopp::Tissue | private |
| swap_existing(std::shared_ptr< Cell > *x) | tumopp::Tissue | private |
| time_ | tumopp::Tissue | private |
| Tissue(size_t initial_size=1u, unsigned dimensions=3u, const std::string &coordinate="moore", const std::string &local_density_effect="const", const std::string &displacement_path="random", const EventRates &init_event_rates=EventRates{}, uint32_t seed=std::random_device{}(), bool verbose=false, bool enable_benchmark=false) | tumopp::Tissue | |
| to_nearest_empty(const coord_t ¤t) const | tumopp::Tissue | private |
| treatment(double death_prob, size_t num_resistant_cells=3u) | tumopp::Tissue | |
| verbose_ | tumopp::Tissue | private |
| write_benchmark(std::ostream &) const | tumopp::Tissue | |
| write_drivers(std::ostream &) const | tumopp::Tissue | |
| write_history(std::ostream &) const | tumopp::Tissue | |
| write_snapshots(std::ostream &) const | tumopp::Tissue | |
| ~Tissue() (defined in tumopp::Tissue) | tumopp::Tissue |