tek::Transposon Member List

This is the complete list of members for tek::Transposon, including all inherited members.

activity() const noexcept	tek::Transposon	inline
ACTIVITY_	tek::Transposon	privatestatic
calc_activity(uint_fast32_t num_mutations)	tek::Transposon	privatestatic
can_speciate() noexcept	tek::Transposon	inlinestatic
dn() const noexcept	tek::Transposon	inline
ds() const noexcept	tek::Transposon	inline
has_indel() const noexcept	tek::Transposon	inline
has_indel_	tek::Transposon	private
hyperactivate() noexcept	tek::Transposon	inline
indel() noexcept	tek::Transposon	inline
initialize()	tek::Transposon	inlinestatic
INTERACTION_COEFS() noexcept	tek::Transposon	inlinestatic
INTERACTION_COEFS_	tek::Transposon	privatestatic
INTERACTION_COEFS_clear() noexcept	tek::Transposon	inlinestatic
INTERACTION_COEFS_emplace(uint_fast32_t x, uint_fast32_t y, double coef) noexcept	tek::Transposon	inlinestatic
INTERACTION_COEFS_get(uint_fast32_t x, uint_fast32_t y)	tek::Transposon	inlinestatic
is_far_enough_from(const Transposon &other) const noexcept	tek::Transposon	inline
is_hyperactive_	tek::Transposon	private
MAX_TRANSPOSITION_RATE	tek::Transposon	static
mutate(URBG &engine) noexcept	tek::Transposon	inline
nonsynonymous_sites() const noexcept	tek::Transposon	inline
nonsynonymous_sites_	tek::Transposon	private
NUM_NONSYNONYMOUS_SITES	tek::Transposon	static
NUM_SPECIES_	tek::Transposon	privatestatic
NUM_SYNONYMOUS_SITES	tek::Transposon	static
operator*(const Transposon &other) const noexcept	tek::Transposon	inline
operator-(const Transposon &other) const noexcept	tek::Transposon	inline
operator<<(std::ostream &, const Transposon &)	tek::Transposon	friend
OVER_NONSYNONYMOUS_SITES	tek::Transposon	static
OVER_SYNONYMOUS_SITES	tek::Transposon	static
param(const param_type &p)	tek::Transposon	static
param()	tek::Transposon	inlinestatic
PARAM_	tek::Transposon	privatestatic
param_type typedef	tek::Transposon
speciate() noexcept	tek::Transposon	inline
species() const noexcept	tek::Transposon	inline
species_	tek::Transposon	private
synonymous_sites() const noexcept	tek::Transposon	inline
synonymous_sites_	tek::Transposon	private
THRESHOLD_	tek::Transposon	privatestatic
transposition_rate() const noexcept	tek::Transposon	inline
Transposon() noexcept=default	tek::Transposon
Transposon(DNA< NUM_NONSYNONYMOUS_SITES > &&non, DNA< NUM_SYNONYMOUS_SITES > &&syn) noexcept	tek::Transposon	inline
Transposon(const Transposon &)=default	tek::Transposon
Transposon(Transposon &&) noexcept=default	tek::Transposon
write_activity(std::ostream &, double alpha, unsigned int beta)	tek::Transposon	static
write_fasta(std::ostream &) const	tek::Transposon
write_metadata(std::ostream &) const	tek::Transposon
write_sequence(std::ostream &) const	tek::Transposon
write_summary(std::ostream &) const	tek::Transposon